Welcome!

On this site you will find the protocols that we routinely use in my lab to collect and analyze fungal samples such as sporing bodies, anamorphs, cultures and environmental samples (soil, roots).

If you use them for your research, thank you for citing our publications.

Field

Mycorrhizal roots

Spore mats

Lab

CTAB DNA extraction

Rapid DNA extraction

Data analyses

Illumina metabarcoding with AMPtk and R

Illumina metabarcoding with Trimmomatic, QIIME and ITSx

This site and it’s original source code are copyright © 2022 by Camille Truong.